In this section you will find departmental specific information. 

The department of Microbiology includes expertise in Bacteriology, Virology, Serology, Mycology, Parasitology, Mycobacteriology, Molecular Diagnostics and Infection Control.

The department of Cellular Pathology includes expertise in Histopathology, Cytology, Andrology, Mortuary and Bereavement Services.

The Department of Blood Sciences includes expertise in Clinical Biochemistry, Immunology, Haematology and Blood Transfusion.

Clinical Biochemistry

The Clinical Biochemistry department operate a 24/7 service from laboratories based at Darlington Memorial Hospital and University Hospital of North Durham. Serving the CDDFT Acute sites and GP's across Darlington, North Durham and Durham Dales, the service analyses a range of samples including blood, urine and faeces to help clinicians in the diagnosis, monitoring and investigation of pathological conditions.

Offering an urgent turnaround time of 1 hour from sample receipt, the Clinical Biochemistry department offer a wide range of tests and are available for advice via the telephone 24 hours a day. Test information (sample requirements and volumes) can be located in the Test Directory. The department offers the same repertoire across both sites with the following exceptions:

  • UHND only - Xanthochromia, TPO, PTH
  • DMH only - Bile acids, CEA, CA125, CA153, CA199, Valproate, Phenytoin, Theophylline, Carbamazepine, Procollagen Type 3 Peptide, SHBG, Prolactin, Progesterone, LH, FSH, Testosterone, Oestradiol, Calprotectin, Vitamin D.

A Consultant Chemical Pathologist/Clinical Biochemist can be contacted for clinical advice and interpretation of tests, via the Biochemistry laboratory or via the hospital switchboard. This service is available both routinely and out of hours.

Within the laboratory staff realise that behind every sample there is a patient and as such we work to high standards to ensure that our contribution to the patient pathway continues to meet the needs of our users and positively impact on patient care.

Cellular Pathology

Title/Office

Name

Ext. No.

Consultant Pathologist

Dr Barrett

32427

Consultant Pathologist

Dr Sidhu

32432

Consultant Pathologist

Dr Patel

32451

Consultant Pathologist

Dr Sehgal

32987

Consultant Pathologist

Dr Nair

37188

Consultant Pathologist

Dr Lavaei

32571

Associate Specialist in Pathology

Dr Jassar

32455

 

Pathology Manager

Nicola Sherriff

44596 / 07900138572

Cell Sciences Service Manager

Andy Wilde

32435

Cellular Pathology Manager

Jennifer Siddall

32447

 

Histology

 

Histology Laboratory

32446 / 32114

Histology Office / Results

32457

Andrology

32446

Cytology

32446 / 32114

Immunohistochemistry (IHC)

32257

Mortuary

 

UHND

32300

DMH

43594

Cytology

Cytology is located within the Pathology department at University Hospital of North Durham, on the lower ground floor, between the lifts and stairs C and D. The laboratory opening hours are: 8.30am - 4:30pm, Monday to Friday.

Investigations for malignant cells

Fresh specimens should be sent to the laboratory as soon as possible to minimise deterioration of the cell content as interpretation may be adversely affected if there is significant delay. Specimens which are fixed prior to receipt by the laboratory (i.e. miscellaneous brushes) are not however critically affected by delays. Advice is always available from the laboratory - Extension 32446.

Turnaround time

We aim to provide 80% of results within 72 hours of specimen receipt in the laboratory unless a second opinion and / or ancillary tests are required. Urgent specimens will take an absolute minimum of 2 hours to be reported if fresh upon receipt. (Some fine needle aspirates and specimens received fixed may be available for reporting sooner.)

You will need to carefully discriminate between routine and genuinely urgent cases. The latter disrupt normal laboratory practice with significant knock-on effects for other specimens. For urgent requests submit an extension/bleep number for reply.

All gynaecological cytology and cervical screening is performed at the Queen Elizabeth Hospital in Gateshead. For any further information, please contact: 0800 953 7610

All Diagnostic Cytology samples must be kept refrigerated. It is essential that samples are transported to the pathology department as quickly as possible to avoid degeneration.

(a) Sputum

Specimen: Fresh early morning deep cough sputum is required, i.e. first sputum production of day, before the patient has eaten or cleaned teeth.

(b) Serous Effusions

No anticoagulant or fixative.

Specimen: Fresh. Large volumes of fluid should be physically mixed and a representative universal container of fluid sent. Any clots present should be sent in the fluid as these often contain large numbers of cells. Specimen to reach the laboratory within two hours. (If necessary may be kept overnight in the fridge but sub-optimal results may be obtained.)

(c) Urine

NOT Boric Acid universal.

Specimen: Fresh. Specimen must not be first urine of the day. A whole specimen of urine should be collected after the patient has walked around (if mobile) for a little while. Specimen must reach laboratory as soon as possible as urine is hostile to the cells and degeneration is very rapid. They must be in a white top universal (20ml).

(d) Fine Needle Aspirates (All sites)

Specimen: Contents of aspiration needle should be blown with syringe onto an appropriate number of slides, spread quickly (as blood film) to produce monolayer and AIR DRIED AS RAPIDLY AS POSSIBLE which usually means wafting the slides in the air. Slides should then be sent in dry slide container to the laboratory as soon as feasible. If fluid is aspirated this should be sent to the laboratory in a sterile universal container as soon as possible. The discarded needle can be placed in the Cytolyt for a needle rinse preparation. Technical advice is available - Extension 32446.

(e) Bronchial Brush Specimens

Specimen: The brush should be immediately cut and dropped into a container of Cytolyt - supplies of Cytolyt should be available on all endoscopy sites.

(f) Bronchial Lavage/Washing Specimens

Specimen: Fresh. Lavage and trap specimens should be collected and sent to laboratory within two hours.

(g) EBUS

Specimen: Immediately place sample into a container of Cytolyt and transport to the histology specimen reception before 15:30 to be processed on the same day, samples received after this time may be subject to a 24hr delay.

(h) CSF

CSF samples for cytological investigations must be prepared urgently and ideally within 4 hours of the sample being taken to avoid degeneration.

Samples should be placed into a white topped universal without any fixative and sent with a Cellular Pathology request form.

At least 1ml of sample should be sent to ensure all required tests can be performed.

ALL cytology samples should be sent in the white refrigerator transport bags if sending from sites other than UHND

Minimum requirements

Samples should be sent to the laboratory fully labelled in a safe manner.

Samples should be in a separate transport bag with the completed request form attached. Sample containers and request forms must not be kept within a single bag to prevent contamination of the request form.

Samples can only be accepted for routine processing if there is no leakage, correct labelling, accompanying request form, no indication of high risk and appropriate container used.

Rejection of samples will depend on: -

Ability to obtain a repeat sample e.g. histology samples

The health risk to staff

Ability to correctly identify the patient

MINIMUM IDENTIFICATION FOR THE FORM:

Routine samples

  • Full name or other unique coded identifier
  • Date of birth
  • Hospital Number or NHS Number
  • Address for GP samples
  • Source of request
  • Consultant / Requesters code for OPD or Clinic requests
  • Date and time of collection
  • For confidential samples

Unique coded identifier

  • Source of request
  • Date and time of collection
  • Additional information expected. Requester's code and signature.
  • Hospital number mandatory for transfusion related requests

Andrology

Andrology (Male Infertility Semen Analysis) is offered at University Hospital North Durham (UHND) Histopathology Laboratory. The Pathology department is located on the lower ground floor, between the lifts and stairs C and D.

An appointment system is in place for all semen analysis at UHND. Patients who have not received an appointment from the Specialist Nurse led Fertility Clinic can call the laboratory to arrange an appointment time to drop off their sample. Samples will be accepted by appointment only. Samples are to be produced at home and brought to UHND for the appointment, preferably within one hour of production. There are no facilities at UHND available to produce samples.

The laboratory opening hours are: 8.30am - 4:30pm, Monday to Friday. You can call the laboratory on: 0191 3332446

 

Turnaround time

We aim to provide most of our results within 48 hours of specimen receipt in the laboratory however when that is not possible our turnaround time for Andrology is 7 days from receipt.

Sample requirements

  • The laboratory supplies batch tested and quality assured 60ml white specimen containers. Containers that have not been batch numbered and weighed cannot be used as we cannot guarantee their quality or toxicity.
  • A completed Cellular Pathology Request form. SAMPLES WILL NOT BE ACCEPTED WITHOUT A COMPLETED REQUEST CARD.
  • Patient Instruction Sheet.

Histopathology

Histopathology is the examination of biopsy or excision material taken from a patient to detect and diagnose disease, disease progression or response to treatment. The Histopathology department at University Hospital of North Durham receives over 35,000 requests a year. It serves three acute hospitals and GP's from the County Durham region, as well as samples from dental practices and private healthcare facilities. The laboratory holds UKAS accreditation for ISO 15189:2012.

Routine specimens

All routine specimens for histological examination should be placed as soon as possible into 10% neutral buffered formaldehyde solution (this can be obtained from the Histology Department).  The specimen to fixative volume ratio should be approximately 1:20, therefore specimens should always be sent in an appropriately sized container.  Please note that this ratio may not be achievable for larger specimen types.  Specimens unable to be sent to the laboratory the same day should be left in fixative at room temperature (not in a refrigerator).  Please note that specimens unable to be placed in fixative should be stored in a dry pot and kept in a refrigerator (not at room temperature) for a maximum period of 72 hours. Instructions for completing request cards can be found here.  Ice forms can also be used and must be completed in full.

Turnaround times

(a)     For urgent frozen section specimens - results will be telephoned back, usually within 30 minutes of receipt of the specimen within the laboratory (a typewritten report will follow subsequently).

(b)     For formalin fixed specimens turnaround time depends upon several variables including the specimen size and type, time of receipt etc.  These affect fixation and processing schedules.  Please discriminate very carefully any specimen on which an urgent report is required - specimens identified as such have a marked knock-on effect onto ALL of the rest of the laboratory activity and will therefore affect turnaround time for the rest of your biopsies.

The histology department works towards the following turnaround times

  • 7 days - Urgent cases
  • 14 days - Cancer two week wait
  • 21 days - non-urgent cases

The above times relate to the interval between the specimen being taken and the report being signed and verified by the pathologist.

The department participates in number or EQA schemes for routine, special stains and immunocytochemistry.

Specimen packaging

Histology containers should be placed in either the sealed wallet attached to the request card, or within a clear bag. The request card and the first sealed bag should be placed into a second bag and sealed to avoid contamination of the request card.

Specimen transport to pathology

At Bishop Auckland General Hospital and Darlington Memorial Hospital, yellow top specimen containers are able to be carried (without the use of a trolley) to the pathology reception where they will be placed in the inter-site transit bags.

At University Hospital of North Durham, all specimens should be directly delivered to Cellular Pathology during opening hours, or Pathology Specimen reception outside of opening hours.

At all sites, pathology specimens in a white specimen bucket must be transported to the pathology laboratory via the use of a solid wheel based trolley. Formalin containers should not be transported within patient/visitor lifts, and if large quantities, should be transferred in an unoccupied lift to prevent over exposure to Formalin.

Histology Specimens must NOT be transported through the Air POD system.

Remote clinics, GP Surgeries, other to Histology, UHND

Specimens should be placed in a central area and will be collected via the trust courier system who use dedicated pathology transit containers

  • Direct Routes to UHND

Transit via DMH

Monday-Friday

Shotley Bridge - 08:30 and 17:00

Chester-Le-Street - 10:00 and 14:30

Saturday

Shotley Bridge - 11:45

Chester-Le-Street - 11:00

Richardson - 09:45

Sunday

No dedicated transport from community sites. A request can be made for to the Trust Courier service by contacting 01325 743552

 

Monday - Friday

Richardson - 16:45

Sedgefield - 11:30 and 15:30

Weardale - 13:30 and 15:45

Saturday & Sunday

No dedicated transport.

Note: If a courier is not available, provided the samples have been placed within Formalin, they are stable to wait for the next transit.

Transport containers

Histology samples are classified as a Category B Biological Substance and as such should be packaged as follows:

  1. Histology Pot sealed (Primary Packaging).
  2. The Primary Package should be placed within another bag or container with sufficient absorbent material to absorb the blood / formalin that can leak from the container (Secondary Packaging).
  3. The secondary packaging should then be placed within a box or rigid outer container that clearly shows the UN 3373 Hazard Diamond with the phrase Biological Substance Category B visible. The size of the diamond must be a minimum of 50mm on each side.

What are turnaround times and how are they measured?

The local cellular pathology turnaround time (TAT) for each specimen type is defined as the time of the receipt of the specimen into the cellular pathology laboratory (located at UHND) to the time when the initial report is available to the requester. Cellular pathology TATs targets are agreed with our service users.

Why are cellular pathology turnaround times longer than other areas of pathology?

Every histopathology specimen must be examined macroscopically and dissected by an appropriate member of staff in the laboratory. After dissection, small pieces of the sample are placed into a tissue processor machine. These machines are vital for fixing the specimens in formalin and impregnating the tissue with paraffin wax. This is a process that usually occurs overnight and ensures the sample is stable enough to store and perform any kind of future testing.

What about urgent results?

Preliminary reports may be issued for urgent or partial results e.g. a simple report may be released within a couple days of receipt, but the results of any immunohistochemical testing or molecular testing may be available at a later date. If any further testing is pending, this information will be included within the preliminary report.

The department aims to release 80% of urgent results within 7 days.

The histopathologists examine every case prior to producing a report and may contact the requester when clinically appropriate. Andrology samples are examined and authorised by a Biomedical Scientist.

Any urgent request must be communicated to the laboratory by using the cellular pathology request card, or by phone call. See individual handbook pages for further details.

Turnaround Times in Cellular Pathology

 

Pathway

Average Measured TAT to completed report

(based on June 2022)

Average Measured TAT to completed report

(based on June 2023)

Defined TAT to completed report

(agreed target)

Urgent Samples

Samples that have been triaged as "urgent" based on clinical details or following a clinician phone call to department

 

73% in 7 days

 

95% in 10 days

 

100% in 21 days

 

 

76% in 7 days

 

97% in 10 days

 

99.5% in 21 days

 

 

80% 7 days

 

95% 10 days

 

100% 21 days

 

 

Priority / 2 Week Wait

Samples that have been triaged as "Priority" or "2WW" based on clinical details

 

76% in 14 days

 

92% in 21 days

 

80% in 14 days

 

95% in 21 days

 

80% in 14 days

 

100% in 21 days

 

 

Routine Samples

Samples that have been triaged as "Routine" based on clinical details

 

91% in 21 days

 

85% in 21 days

80% in 21 days

 

 

For more information regarding what types of specimens may be assigned a particular pathway, please see below:

Urgent Samples - 7 day reporting target

Needle Core Biopsies

  • H&N
  • Lymph node
  • Lung
  • Breast
  • Liver (malignant)
  • Lymphoma
  • Other "?Malignancy"

Cervical Biopsies and LLETZ (CGIN, Invasive carcinoma, glandular abnormalities, SCC)

Endometrial for hyperplasia

Products of Conception - ectopic

Temporal Arteries

Vocal cord biopsy for cancer

?SCC on non-basic skin (e.g. anus, foreskin, genital, oral, etc.)

Incisional biopsies for ?MM

Melanocytic malignancy excisions (M5)

Cytology - e.g. Breast, lung, GI and head & neck (not urine and peritoneal washings)

Priority / 2WW - 14 day reporting target

Any specimen from under 16's (excluding appendix)

Any specimen labelled as 2WW

Bowel Cancer Screening Programme

M4, ?MM, LMM, Melanoma excisions

Incisional or punch biopsies for ?SCC, ?BCC

Vocal cord biopsy (non-cancer) e.g. Reinke's oedema, hoarseness

Bladder biopsies/chippings

Prostate core biopsies

Breast resection

Cancer colons

Cancer uterus

Cytology - urine and peritoneal washings

Routine Samples - 21 day reporting target

Appendix

Cervical biopsies and LLETZ (up to CIN3)

Endometrial biopsies

Endoscopic biopsies

Fallopian tubes and vas deferens (for sterilisation)

Femoral Head

Foreskin

Gallbladder (excluding malignancy)

Head and Neck biopsies (excluding malignancy)

Prostate chippings

Skin excision (including WLE MM Scar, BCC, SCC, benign)

Benign skin biopsies

Prolapsed uterus (resection)

Benign colon disease (resection)

Andrology sample for fertility

UHND Histopathology have been making progress in delivering a system for eliminating large amount of formalin retained in theatres.

Formalin is a widely used tissue fixative that preserves tissue samples in as close to a life-like state as possible for accurate diagnoses. The major limitation of formalin is that it is hazardous (especially in large quantities) and is a controlled substance in the Trust.

To limit the amount of staff across the Trust exposed to formalin and produce a safer system of working, UHND Histopathology ran a trial period receiving benign organ resections and found the tissue received to be adequately preserved when it is refrigerated and reaches the department in no longer than 72 hours.

When sending samples to histopathology the specimen will require a yellow topped pot containing formalin or a white bucket.

If in doubt, please contact the department on: 0191 333 2446 to clarify which method would be most suitable for your specimen

Haematology & Transfusion

The Haematology and Blood Transfusion laboratories at Darlington Memorial Hospital and University Hospital of North Durham operate a 24/7 service covering both acute CDDFT sites and GP surgeries across Darlington, North Durham and Durham Dales.

CDDFT Haematology Laboratories

The CDDFT Haematology laboratories are located at DMH and UHND. Each laboratory holds UKAS accreditation for ISO 15189:2012 (UKAS accredited testing laboratory No. 8770). The laboratories provide a range of primary Haematological investigations via automated and manual methods. Below is a list of all investigations provided by each site (unless stated otherwise):

  • Full Blood Count
  • Reticulocyte Count
  • Blood Films
  • Erythrocyte Sedimentation Rate (ESR)
  • Coagulation Screening (PT, APTT, Fibrinogen)
  • DDimer
  • Malarial Parasites
  • Glandular Fever Screening
  • Sickle Cell Solubility (UHND only)
  • Thrombophilia Screening (UHND only)
  • Lupus Anticoagulant (UHND only)
  • Anti-Xa Assay
  • G6PD screening (UHND only)
  • Haemoglobinopathy Screening (UHND only)
  • Anticardiolipin antibodies (UHND only)
  • Intrinsic Factor Antibodies (UHND only)

CDDFT Transfusion Service

The CDDFT Blood Transfusion Laboratories, located at UHND & DMH, provide a blood transfusion service to all of the trusts main hospitals, community hospitals, hospices and GPs. The Transfusion Department is both MHRA compliant and has been inspected by UKAS (accredited to ISO 15189:2012). The transfusion laboratory participates in all relevant external quality assurance schemes.

The Blood Transfusion Department test repertoire includes blood group and antibody screening (with associated antibody identification), compatibility testing (serological and electronic issue), phenotyping, antenatal serology, kleihauer testing and Direct Antiglobulin Test. The Blood Transfusion Laboratories provide the following services:-

  • Blood Grouping and Antibody Screening - Routinely available on any patient if clinically indicated. For non-medical reasons e.g. travel, sport, insurance or employment, please contact the laboratory for arrangement under Category II Regulations.
  • Antenatal Serology - A full antenatal serology service is available.
  • Routine Crossmatch - Ideally 24 hrs notice should be given for a non-urgent cross-match. This is to allow sufficient time to investigate any abnormality detected in the antibody screen or cross-match. If 24 hrs notice is not given, it may not be possible to have blood available at the requested time if an abnormality is detected in the course of the investigations. This may result in the last minute cancellation of an elective operation/procedure.
  • Emergency Crossmatch - The laboratory must be informed by telephone. In an emergency, crossmatched blood can normally be provided within one hour of receipt of the sample. Uncrossmatched Group O can be emergency issued to your patient within 5 minutes of requesting on our acute sites (DMH & UHND). In exceptional circumstances, un-crossmatched O Negative (Flying Squad) blood may be used. This can be taken directly from the Blood Bank fridges located at DMH, UHND & BAH. If the Flying Squad blood is used, the laboratory must be informed immediately so that the blood can be replaced and a retrospective cross-match performed. The trust operates a Major Haemorrhage Protocol which all clinical staff should be aware and familiar with. Please refer to POL/Transfusion/0003 Major Haemorrhage Policy for full details (access via Staffnet 'Policies and Procedures' section).
  • Issue of Blood Products - A stock of fresh frozen plasma and cryoprecipitate is kept at UHND and DMH blood banks and is available on request (thawing time 30 minutes). Platelet concentrates are not routinely stored on site and have to be transported from the Blood Transfusion Services in Newcastle on request.
  • De-reserving of Blood - All blood will be de-reserved and removed from the Blood Bank fridge 48 hours after the time it was required. If blood needs to be reserved for a longer period of time, this must specifically be requested.
  • Issue of Batch Products - A stock of albumin, prophylactic Anti-D, Beriplex and Novoseven is kept at UHND and DMH and is available on request. A small stock of prophylactic Anti-D is also kept at BAH. Please refer to appropriate transfusion clinical policy for further details, accessed via Staffnet 'Policies and Procedures' section.

Measurement uncertainty

Measurement uncertainty (MU) is defined as a parameter, associated with the result of measurement that characterises the dispersion of the values that could reasonably be attributed to the measurand. By quantifying the possible spread of measurements an estimate of the confidence in the result may be obtained.

MU stems from imprecision as a result of random effects on the assay systems and so laboratories have to minimise the effects of this and acknowledge this uncertainty.

Calculation of Uncertainty within CDDFT

Within the examination process the laboratory can calculate the measurement of uncertainty that is associated with a measured analyte. We can use our internal and external quality performance checks to assess the individual uncertainties within the measurement system. For further information on our internal and external quality control systems please contact the laboratory.

The MoU is the quantification of doubt, not error. The co-efficient of variation (CV%) or standard deviation (SD) can be considered as the combined uncertainty for results around the mean of a particular concentration of quality control material.

Working Example

For Haemoglobin, the Measurement Uncertainty in June 2017 (DMH) = 2.29%. Therefore, a Haemoglobin reported as 100g/L would have a Measurement Uncertainty of 97.7g/L - 102.3 g/L

Uncertainty of Measurement:

Uncertainty of Mesurement (UoM) is calculated for all FBC results for each QC lot number. The UoM is also calculated for other Haematology results and Coagulation results. These results are available on request from the Haematology Laboratory. If you require this information please contact Haematology DMH #43252 or Haematology UHND #32442.

Immunology

Immunology is part of the Department of Clinical Biochemistry and offers investigations including immunochemistry, serum protein electrophoresis and serum free light chains. Other tests such as autoantibodies, allergy testing and tests for coeliac disease are referred to external laboratories.

We aim to provide the highest quality of service with prompt delivery of accurate results, backed by specialist scientific expertise.

The quality of all of our work is regularly monitored in national External Quality Assurance (EQA) schemes and the laboratory is UKAS accredited to the ISO15189:2012 standards for medical laboratories. Most tests are carried out using standard serum samples, however a few tests require samples to be collected or transported in a special way. Please refer to the Test Directory or contact the laboratory: 01325 743238 for further advice. The department will provide appropriate interpretation of test results. Interpretive comments are added to most test reports.

Test

 

Referral Laboratory

Specimen/  Container

ACETYLCHOLINE RECEPTOR ANTIBODIES

Synonyms: ACR, AChR Ab, ARA

 

Birmingham Heartlands Hospital

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

ADALIMUMAB MONITORING

Includes: Serum adalimumab, anti-adalimumab antibodies

Royal Victoria Infirmary, Newcastle

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

ADRENAL ANTIBODIES

Royal Victoria Infirmary, Newcastle

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

AQUAPORIN 4 ANTIBODIES

Synonyms: Neuromyelitis optica Ab, NMO, AqP4

Churchill Hospital, Oxford

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

CONNECTIVE TISSUE AUTOANTIBODY SCREEN

Screen includes:

Anti-DNA abs

Anti-Chromatin Abs

Anti-Ribosomal P abs

Anti-Ro-52

Anti-Ro-60

Anti-La Abs

Anti-Centromere

Anti- Sm

Anti- RNP 68 Abs

Anti- Scl-70

Anti- Jo-1

Synonyms: CTAU, Extractable Nuclear Antigen SSA, SSB

 

Royal Victoria Infirmary Newcastle

 

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

C1-ESTERASE INHIBITOR FUNCTION/ Level

Synonyms: C1E

Royal Victoria Infirmary, Newcastle

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

C1q

Protein Reference Unit, Sheffield

Standard

 

 

Paediatric

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

C3 C4/ COMPLEMENT

James Cook University Hospital, Middlesbrough

Standard

 

 

Paediatric

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

 

C3-NEPHRITIC FACTOR

Royal Victoria Infirmary, Newcastle

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

CARDIAC MUSCLE ANTIBODIES

Protein Reference Unit, Sheffield

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

CH100 and AP100

Synonyms: Classical (CH100) and alternative (AP100)

pathways of complement activation

 

Royal Victoria Infirmary, Newcastle

 

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

CRITHIDIA dsDNA IgG ANTIBODIES

Protein Reference Unit, Sheffield

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

 

 

dsDNA ANTIBODIES

Synonyms: DNA Ab CTAU

Royal Victoria Infirmary, Newcastle

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

EPIDERMAL ANTIBODIES

Synonyms: Skin Reactive Ab, Bullous Ab

Royal Victoria Infirmary, Newcastle

Standard

 

Paediatric

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

0.8 mL Ochre top MiniCollect

GABAb RECEPTOR AND AMPA 1/2 RECEPTOR ANTIBODIES

Synonyms: Glutamate receptor 1/2 antibodies

Churchill Hospital, Oxford

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

GANGLIOSIDE ANTIBODIES

Synonyms: GM1, GQ1b

Churchill Hospital, Oxford

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

GLIADIN ANTIBODIES

NB: this test MUST be approved by the duty biochemist or  Biochem/Imm manager BEFORE being sent

Protein Reference Unit, Sheffield

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

GAD ANTIBODIES

Synonyms: Glutamic acid decarboxylase Ab, GAD65

Cumberland Infirmary, Carlisle

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

GLYCINE RECEPTOR ANTIBODIES

Churchill Hospital, Oxford

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

HISTONE ANTIBODIES

Protein Reference Unit, Sheffield

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

HLA DQ TYPING FOR COELIAC DISEASE

Synonyms: HLA DQ2, HLA DQ8

NB: this test MUST be approved by the duty biochemist or  Biochem/imm manager BEFORE being sent

NHS Blood and Transplant, Newcastle

Standard

 

Paediatric

 

 

Neonates

 

X2 4.0 mL Lavender top Vacuette

 

X2 2.5 mL Lavender top

Reduced draw

 

X2 0.8 mL Lavender  top MiniCollect

IgG subclasses

Synonyms: Immunoglobulin G subclasses

James Cook University Hospital, Middlesbrough

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

INFLIXIMAB MONITORING

Includes: Serum infliximab, anti-infliximab antibodies

Synonyms: Remicade, Remsima, Inflectra

Royal Victoria Infirmary, Newcastle

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

INSULIN ANTIBODIES

Protein Reference Unit, Sheffield

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

IA2 ANTIBODIES

Synonyms: Tyrosine phosphatase-related islet antigen 2

Royal Victoria Infirmary, Newcastle

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

ISLET CELL ANTIBODIES

Synonyms: ICA

Royal Victoria Infirmary, Newcastle

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

LGI1 and CASPR2 ANTIBODIES

Synonyms: VGKC-complex antibodies, Leucine-rich glioma inactivated 1, Contactin-2 associated proteins.

Churchill Hospital, Oxford

Standard

 

Paediatric

 

 

Neonates

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

 

Can also be tested upon CSF

White top Sterile universal container (CSF)

 

LIVER AUTOANTIBODY SCREEN

Screen includes:

- (anti) nuclear factor (ANF) = antinuclear antibody (ANA)

- mitochondrial antibody (AMA)

- smooth muscle antibody (SMA)

- gastric parietal cell antibody (GPC)

- liver-kidney microsomal antibody (LKM)

- ribosomal antibody (reported if positive)

Synonyms: LAUT

 

Royal Victoria Infirmary Newcastle

 

 

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

 

LIVER  AUTOANTIGENS

Screen includes: LKM-1, LC-1, SLA/LP, M2

Synonyms: Liver blot

Royal Victoria Infirmary, Newcastle

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

LYMPHOCYTE SURFACE MARKERS

Synonyms: Lymphocyte subsets

Royal Victoria Infirmary, Newcastle

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL Lavender Top Vacuette

 

2.5 mL Lavender Top

Reduced draw

 

0.8 mL Lavender top MiniCollect

 

MUSK ANTIBODIES

Synonyms: Muscle-specific kinase antibody

Churchill Hospital, Oxford

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

 

MYELIN ASSOCIATED GLYCOPROTEIN ANTIBODIES

Synonyms: MAG

Churchill Hospital, Oxford

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

MYELIN OLIGODENDROCYTE GLYCOPROTEIN ANTIBODIES

Synonyms: MOG

Churchill Hospital, Oxford

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

MYOSITIS SCREEN

Screen includes:

- Mi-2, Ku, PM-Scl100, PM-Scl75, Jo-1, SRP, PL-7, PL-12, EJ, OJ, Ro-52

Protein Reference Unit, Sheffield

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

NEUTROPHIL RESPIRATORY BURST

Synonyms: Neutrophil function test, neutrophil oxidative burst, NBT, DHR

Royal Victoria Infirmary, Newcastle

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL Lavender Top Vacuette

 

2.5 mL Lavender Top

Reduced draw

 

0.8 mL Lavender  top MiniCollect

NMDA ANTIBODIES

Synonyms: N-methyl-D-aspartate receptor antibodies, NMDAR

Churchill Hospital, Oxford

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

 

Can also be tested upon CSF

White top Sterile universal container (CSF)

 

OLIGOCLONAL BANDS

Synonyms: OCB

Royal Victoria Infirmary, Newcastle

4.0 mL White top yellow ring Vacuette and

White top Sterile universal container (CSF)

OVARIAN ANTIBODIES

Royal Victoria Infirmary, Newcastle

Standard

 

Paediatric

 

 

Neonates

 

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

PARANEOPLASTIC ANTIBODIES

Synonyms: Neuronal Abs, NEO

Churchill Hospital, Oxford

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

 

Can also be tested upon CSF

White top Sterile universal container (CSF)

 

PARATHYROID ANTIBODIES

NO LONGER TESTED - WILL AUTOMATICALLY CANCEL

PLEASE SEE DUTY BIOCHEMIST IF TEST IS REQUIRED

 

 

 

SALIVARY GLAND ANTIBODIES

Synonyms: Salivary Duct Abs

Protein Reference Unit, Sheffield

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

SKELETAL MUSCLE ANTIBODIES

Synonyms: Striated Muscle Abs

Protein Reference Unit, Sheffield

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

VGCC ANTIBODIES

Synonyms: Voltage gated calcium (Ca2+) channel antibodies, LEMS

Churchill Hospital, Oxford

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

VGKC ANTIBODIES

Synonyms: Voltage gated potassium (K+) channel antibodies,

VGKC-complex antibodies

Churchill Hospital, Oxford

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

 

 

ZINC TRANSPORTER 8 ANTIBODIES

Synonyms:ZnT8

Protein Reference Unit, Sheffield

Standard

 

Paediatric

 

 

Neonates

 

4.0 mL White top yellow ring Vacuette

 

2.5 mL Yellow top white ring

Reduced draw

 

0.8 mL Ochre top MiniCollect

 

 

 

Mortuary & Bereavement Services

Bereavement support office

The role is to offer support to families at what is a very difficult time for them.  An immediate point of contact so that they feel they are being listened to and dealt with in  a timely, organised way by people who understand their individual needs and who can give them time. An area where they will be given the first steps of guidance from registering the death to where, how and if they need any follow on guidance. To feel that this is not the end for them but that we are still there if they have any issues or just further support in the near future.

A quality bereavement service is an essential component of an end of life care pathway.

The aim is to:

  • Assist staff in caring for the patient's families/representative around the time of death and assist in the issuing of 'The Medical Certificate of Cause of Death (MCCD)'.
  • Provide appropriate support to families, carers and significant others who are subsequently bereaved.  Guiding and supporting the deceased representatives through the complexities of registering a death, making the initial contact with funeral directors, and any other complex administration and paperwork required. 
  • Liaise with the Trust's contracted Funeral Director on all hospital funerals for deceased patients who have no next of kin or where the families have no financial means in which to pay for the funeral.
  • Develop and update the booklet 'Information and Advice for the Bereaved' which is for all bereaved and given at time of death.

Quality of care is crucial for individuals at the end of their life

The experience around the time of death and how this is delivered and received by the Families/ carers and representatives afterwards can have an influence on the grieving process and the long term health of the bereaved.

Overall impression left with the individual of how as a Trust we cared/managed their loved one can be changed not because of the care given but the failure to manage the issuing of the MCCD, belongings and any other issues in the following hours after the death. A good experience around the time of death and afterwards can positively influence the grieving process.

We must always remember that the deceased is still a patient in our care until they leave the mortuary.

Requests

Hospital Autopsies

Before completing any consent form or request for a hospital autopsy, telephone the appropriate pathologist through their secretary (Ext. UHND 32457) Advice regarding what tissue is likely to be retained, who is eligible to obtain consent for the autopsy and consent for the possible subsequent retention of tissue can then be given directly.  The pathologists will ask for the case notes, request form and consent form to be sent to the laboratory.

If you are interested in viewing  findings then please provide availability details and contact numbers.

Coroners Autopsies

When reporting a death to the Coroner, the Coroner's Office should be contacted:

As a general guideline deaths listed below should be referred to the Coroner (the list is not comprehensive and if there is any doubt contact the Coroner's Office for advice).

  1. All deaths in which the doctor has not attended in the last illness or within 14 days of the death.  This usually refers to deaths in the community.
  2. Sudden Unexpected Death - When a sudden death occurs in an in-patient, which was NOT to be expected from the nature of his illness.  Persons brought in dead, who die during admission or shortly after admission to the wards, where insufficient clinical history, examination or investigations are available to justify a firm opinion as to the cause of death (the underlying cause of death, NOT the MODE of death).
  3. Accidents and injuries OF ANY DATE which are considered to have contributed to the cause of death.
  4. Anaesthetics, Surgical Operations and Therapeutic Procedures:-Deaths during or before complete recovery from anaesthetic are reportable, as are deaths during, or as a consequence of any operation or therapeutic procedure (such as cardiac catheterisation, endoscopy, angiography or any other radiological diagnostic procedure).The common misapprehension that only deaths occurring within twenty-four hours of operation are reportable should be discarded - no time limit exists, if any caused connection is thought to exist, e.g. pulmonary embolism within the first fortnight.  Where the procedure was performed as a consequence of any injury, the death is always reportable.
  5. Deaths due to crime or suspected crime.
  6. Deaths due to Industrial Disease (or in which industrial disease was possibly contributory), see Appendix 1. Of particular importance are miners with pneumoconiosis and any suspected mesothelioma.
  7. Deaths due to starvation or neglect (including hypothermia).
  8. Deaths in which the deceased was in receipt of an industrial or war disability pension.
  9. Infant deaths which are unexplained (S.I.D.S.).
  10. Persons dying in legal custody.
  11. Deaths due to poisoning of any cause (includes food poisoning as well as more obvious causes).
  12. Traumatic deaths (e.g. R.T.A., domestic injuries).
  13. Suicide/suspected suicide.
  14. Unidentified bodies.
  15. Circumstances in which a relative or similar expresses dissatisfaction or outright criticism of the standard of medical or nursing care (best discussed with the Pathologist in the first instance).
  16. Alcoholism - where acute intoxication but not the effects of chronic alcoholism is suspected as the cause of or contributing to death.
  17. Death related to the use of recreational drugs.
  18. Deaths related to abortion where any cause other than natural is suspected.

Turnaround time

All post-mortems are performed as soon as possible depending upon the circumstances of each particular case.

Clinicians are encouraged to attend and prior notice will be given as regards the time of the autopsy wherever possible.

Summary findings (issued as a cause of death) will be sent to the deceased's GP within several hours of completion of the autopsy in most cases (a notable exception being Coroner's autopsies which will proceed to an inquest).

High risk cases (infectious disease)

Please note that all such bodies submitted to the mortuary (for post-mortem or not) must clearly be identified as a high risk and all appropriate staff (nursing, portering, mortuary) must be informed.  Appropriate body bags and labels must be used.  (See Infection Control Manual, Chapter 9).

In general known high risk cases will not be autopsied unless this is vital.  The request form must clearly identify infectious risk and its nature.  The cases must be discussed with the relevant pathologist.  Cases of HIV and Hepatitis B (or similar infections) will be performed as a 'high Risk procedure.   CJD and other category 4 infections will not be performed.  If an autopsy is required on these cases the pathologist will liaise with other hospitals.

Disposal of Foetal tissue 

For any queries as regards disposal of foetal tissue, kindly refer to the unit policy (available in the department of Obstetrics and Gynaecology).

For viewing of bodies

Please liaise with mortuary technical staff prior to directing relatives to the mortuary for body viewing (extension UHND 32300, or DMH 43594).  Unbooked attendance for relative viewing can lead to unnecessary conflict, delays and distress for relatives of their expectation for viewing cannot be accommodated.

Consent & the Hospital Post Mortem:

  • Can be performed with the prior consent of the deceased.
  • Deceased's nominated representative
  • Person in a qualifying relationship

Nominated Representative

  • Adults may appoint one or more persons
  • Where deceased persons wishes are not known, the nominated representative must give consent.
  • Must verify the NR's authority to act on behalf of the deceased person

Appointment of a Nominated Representative:

  • May be general, or limited to consent in relation to one or more activities
  • May be made orally (in the presence of at least two witnesses)
  • May be made in writing:

Signed in the presence of at least one witness who attests the signature, or

Signed at the direction of the person making the appointment, in their presence & that of at least one witness who attests the signature, or

Contained in the deceased person's will

Qualifying Relationships (ranking in highest priority first)

  • Spouse or partner (including civil or same sex partner)
  • Parent or child
  • Brother or sister
  • Grandparent or grandchild
  • Niece or nephew
  • Stepfather or stepmother
  • Half-brother or half-sister
  • Friend of long standing

Discuss the Post mortem examination with the deceased person's relatives or nominee. They need to be given:

  • Honest, clear, objective information
  • Opportunity to talk to someone they can trust & ask questions
  • Reasonable time to reach decisions
  • Support if needed (bereavement, psychological etc)

Those seeking consent should be sufficiently senior & well informed, with a thorough knowledge of the procedure.

Ideally they should be trained in the management of bereavement & in the purpose & procedures of post mortem examinations.

Usually the responsibility of the deceased persons clinician

This responsibility should not be delegated  to untrained or inexperienced staff

Responsible clinician should contact the pathologist who will perform the PM, before discussion with relatives so that:

•        Accurate guidance can be given on which, if any, organs or tissues are likely to be taken.

•        Opportunity for pathologist to be available for any discussion the relatives may wish to have

•        If pathologist certain no organs will be retained then there will be no need to obtain relative consent & this section of the form can be deleted

Microbiology

The Microbiology department is based at University Hospital of North Durham and serves the CDDFT acute sites, community clinics and GPs throughout County Durham. A team of Medical Laboratory Assistants, Associate Practitioners, Biomedical Scientists and Consultant Microbiologists all work closely together to ensure that our patients and service users receive high quality results that support the patient's care journey.

The Microbiology department examines many different sample types to look for evidence of infection using a variety of different techniques, e.g.:

  • Bacterial & fungal culture: specialised growth plates or broths are inoculated with patient specimens and incubated under different conditions and temperature to try and grow and identify bacteria or fungi that may cause infections (pathogens).
  • Antimicrobial sensitivity: bacterial pathogens are tested against a range of antimicrobial agents that could be used to treat the infection they have caused. These tests can help to identify the most appropriate treatment for the patient, as well as identifying antimicrobial resistance.
  • Molecular tests: these tests are useful when pathogens cannot be grown using traditional culture techniques, or would take a very long time. Molecular tests look for pieces of genetic material that are unique to a specific pathogen.
  • Serology / blood tests: these tests are also useful when pathogens cannot be grown using traditional culture techniques, or would take a very long time e.g. viral infections. A range of different tests are used to detect unique parts of a pathogen known as antigens circulating in patient blood. Other tests can detect specific antibodies (part of the natural immune response) to a known pathogen in patient blood. This can be used to detect current or previous infection.

The Microbiology department also works closely with CDDFTs Infection Control team and Public Health England providing testing, screening and epidemiological information relating to infection control. This includes monitoring of communicable diseases and multi-drug resistant pathogens.

Test Repertoire

The Microbiology test repertoire can be found via the test directory and individual handbook pages.

Referred Tests

See the microbiology referral test page for the tests sent via the microbiology department, including details of the referral laboratories and specimen requirements.

Contact Information and Laboratory Opening Hours

Please contact Microbiology by email: cddft.microbiology@nhs.net

Please see the general pathology handbook information pages for further details on contacting Microbiology team.

Test

Referral Laboratory

Specimen / Container

16S Ribosomal RNA Pan-bacterial identification

Great Ormond Street Hospital

Sterile fluids / tissues in a universal container

Acanthamoeba

See individual test directory page

Adenovirus CFT

Infection Sciences, Bristol

Serum / SST (ochre top)

Adenovirus PCR

PCR Laboratory, Freeman Hospital, Newcastle

Blood / EDTA

(purple top) or viral eye swab (green)

Amoebic Serology

University College London (School of Tropical Medicine)

Serum / SST (ochre top)

Antifungal Assay (Itraconazole, Fluconazole, Voriconazole)

Mycology Reference Centre, Manchester, Wythenshawe

Serum / SST (ochre top)

Anti-DNAse B

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Aspergillus IgG Antibodies / Precipitans

Virology, Carlisle (see notes)

Serum / SST (ochre top)

Avian Antibodies (Farmers Lung)

Virology, Carlisle

Serum / SST (ochre top)

Bartonella Antibodies (Cat Scratch)

Discontinued - see comment

Serum / SST (ochre top)

Bilharzia (Schistosomiasis)

University College London (School of Tropical Medicine)

Serum / SST (ochre top)

BK Virus

Infection Sciences, Bristol

Blood / EDTA (renal transplant patients)

 

Urine / sterile universal (white top) for bone marrow transplant patients

Bordatella pertussis antibodies

Must be >14 days post onset of symptoms.

RVPBRU, PHE Colindale

Serum / SST (ochre top)

Bordatella pertussis PCR

PCR Laboratory, Freeman Hospital, Newcastle

Nasopharyngeal secretions / dry swab or sterile universal.

Borrelia Antibodies (Lymes Disease)

Virology, Carlisle

Serum / SST (ochre top)

Brucella Antibodies

University Hospital Aintree, Lower Lane,

Liverpool, L9 7AL

Serum / SST (ochre top)

Cat Scratch (Bartonella Antibodies)

No longer tested, replaced by molecular testing of biopsy samples.

Chlamydia Antibodies

Discontinued - not a recommended test.

CMV (Cytomegalovirus) IgM

Serology, Freeman Hospital, Newcastle Hospital

Serum / SST (ochre top)

CMV (Cytomegalovirus) IgG

Serology, Freeman Hospital, Newcastle Hospital

Serum / SST (ochre top)

CMV avidity

Serology, Freeman Hospital, Newcastle Hospital

Serum / SST (ochre top)

CMV PCR

PCR Laboratory, Freeman Hospital, Newcastle

Blood / EDTA (purple top)

CMV PCR

PCR Laboratory, Freeman Hospital, Newcastle

Urine / sterile universal (white top)

Colistin antibiotic levels

Bristol Antimicrobial Reference Laboratory

Pre-dose Serum / SST (ochre top)

Coxiella Burnetii (Q fever)

Mycological Reference Laboratoryoratory, Bristol PHE,

Serum / SST (ochre top)

Coxsackie Virus

Epsom & St Helier, West Park Hospital, Epsom

Serum / SST (ochre top)

Cryptococcal Antigen

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Delta Ab (Hep B)

PHE Colindale via serology at Freeman Hospital, Newcastle

Serum / SST (ochre top)

Dengue Fever

RIPL, PHE Porton

Serum / SST (ochre top)

Diphtheria antibody

RVPBRU, PHE Colindale

Serum / SST (ochre top)

E. coli O157 serodiagnosis

GBRU, PHE Colindale

Serum / SST (ochre top)

EBV (Epstein Barr)

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

EBV (Epstein Barr) VCA IgM

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

EBV (Epstein Barr) VCA IgG

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

EBV PCR

PCR Laboratory, Freeman Hospital, Newcastle

Blood / EDTA (purple top)

Enteric Virus Investigation inc. Enterovirus & Coxsackie A/B virus

Epsom & St Helier, West Park Hospital, Epsom

Serum / SST (ochre top)

Enterovirus IgM (not cardiac patient)

Epsom & St Helier

Blood / EDTA (purple top)

Enterovirus PCR (cardiac patient)

PCR Laboratory, Freeman Hospital, Newcastle

Viral swab of lesion (green) or faeces sample (sterile universal)

Enterovirus PCR

Epsom & St Helier

Blood / EDTA (purple top)

Eye swab for viral PCRs - Adenovirus, Herpes & VZV

PCR Laboratory, Freeman Hospital, Newcastle

Viral eye swab (green)

Filarial antibody

University College London (School of Tropical Medicine)

Serum / SST (ochre top)

Flu / Respiratory CFTs   (blood)

Infection Sciences, Bristol

Serum / SST (ochre top)

Flu - full respiratory PCRs (viral swab - nose & throat)

PCR Laboratory, Freeman Hospital, Newcastle

Viral nose and throat swab (green) or NPA or BAL (sterile universal)

Fluconazole level

Mycology Reference Centre, Manchester, Wythenshawe

Serum / SST (ochre top)

Galactomannan (Aspergillus Ag test)

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Galactomannan PCR

Manchester

Serum / SST (ochre top)

Glandular fever screen

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Haemophilus Antibodies

Immunology, Carlisle

Serum / SST (ochre top)

Helicobacter Antibody

Discontinued -please send a faeces sample for Helicobacter antigen testing.

Helicobacter culture on Dents medium

GBRU, PHE Colindale

 

 

 

Biopsy in Dents media: must be ordered from the laboratory prior to testing (at least 10 days' notice)

Hepatitis A RNA (hepatitis A IgM confirmation)

Freeman Hospital, Newcastle

Serum / SST (ochre top)

Hepatitis B Markers

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Hepatitis B Delta Antibody

PHE Colindale via serology at Freeman Hospital, Newcastle

Serum / SST (ochre top)

Hepatitis B Viral Load

PCR Laboratory, Freeman Hospital, Newcastle

Blood / EDTA (purple top) or

Serum / SST (ochre top)

Hepatitis B Viral Load (Staff Screening)

West of Scotland Specialist Virology Centre

5 x EDTA (purple top)

Hepatitis C Antibody Confirmation

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Hepatitis C Antigen

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Hepatitis C Viral Load

PCR Laboratory, Freeman Hospital, Newcastle

Blood / EDTA (purple top) or

Serum / SST (ochre top)

Hepatitis C Genotype

PCR Laboratory, Freeman Hospital, Newcastle

Blood / EDTA (purple top)

Hepatitis E IgM

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Hepatitis E IgG

Serology, Freeman Hospital, Newcastle Hospital

Serum / SST (ochre top)

Hepatitis E RNA

Freeman Hospital, Newcastle will send sample to Virus Reference Department, PHE Colindale if get Hep E IgM positive

Blood / EDTA or Serum / SST (ochre top)

Herpes PCR

PCR Laboratory, Freeman Hospital, Newcastle

Viral swab (green)

Herpes Antibodies

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

HHV6 PCR

PCR Laboratory, Freeman Hospital, Newcastle

CSF / sterile universal or

Blood / EDTA (purple top)

Legionella Urine Antigen

Serology, Freeman Hospital, Newcastle

Urine / sterile universal (white top)

Legionella Antibodies

No longer tested - see  Legionella urine antigen test

Leishmaniasis

University College London (School of Tropical Medicine)

Serum / SST (ochre top)

Leptospirosis (Weils disease)

Must be >7 days since onset of symptoms.

RIPL, PHE Porton

Serum / SST (ochre top)

Lymes Disease (Borrelia Antibodies)

Virology, Carlisle

Serum / SST (ochre top)

Malaria antibodies

Hospital of Tropical Diseases, University College London

Serum / SST (ochre top)

Malaria PCR

Malaria Reference Laboratory, London School of Hygiene & Tropical Medicine

Blood / EDTA (purple top)

Meningococcal PCR (see below)

Manchester Meningococcal Reference Laboratory

Blood / EDTA (purple top) or CSF / sterile universal

Meningococcal serology (surveillance)

Manchester Meningococcal Reference Laboratory

Blood / EDTA (purple top)

 

<5 yr old also need serum / SST (ochre top)

Meningococcal serology (post vaccine)

Manchester Meningococcal Reference Laboratory

Blood / EDTA (purple top)

Mumps IgM

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Mumps IgG

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Mycobacteria / TB / AFB

TB Laboratory, Freeman Hospital, Newcastle

Sputum, BAL, tissues, fluids, CSF

 

Mycoplasma IgM (<16yrs old)

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Mycoplasma IgG

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Mycoplasma CFT (patients ≥16yrs old)

 

Infection Sciences, Bristol

Serum / SST (ochre top)

Paired acute and convalescent samples sent.

Parvovirus IgM

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Parvovirus IgG

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Parvovirus PCR

Serology, Freeman Hospital, Newcastle ® Micropathology Ltd, Venture Centre, University of Warwick Science Park, Sir William Lyons Road, Coventry, CV4 7EZ

Blood / EDTA (purple top) or Serum / SST (ochre top)

PCP (Pneumocystis)

Microbiology, Freeman Hospital, Newcastle

Induced sputum or BAL

Pertussis Antibodies

RVPBRU, PHE Colindale

Serum / SST (ochre top)

Pertussis PCR

PCR Laboratory, Freeman Hospital, Newcastle

Nasopharyngeal secretions / dry swab or sterile universal.

Pneumococcal Antigen (blood)

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Pneumococcal Antigen (urine)

Serology, Freeman Hospital, Newcastle

Urine / sterile universal (white top)

Pneumococcal Antibodies (blood)

Immunology, Carlisle

Serum / SST (ochre top)

Prevanar (pneumococcal) vaccine specific serotypes

Manchester Meningococcal Reference Laboratory

Serum / SST (ochre top)

Pneumococcal PCR (Blood, EDTA, CSF)

Manchester Meningococcal Reference Laboratory

Blood / EDTA or CSF / sterile universal

Psittacosis CFT

Infection Sciences, Bristol

Serum / SST (ochre top)

Q Fever (Coxiella burnetii)

Bristol Mycological Reference Laboratoryoratory

Serum / SST (ochre top)

Quantiferon Gold (see below)

TB Reference Laboratoryoratory, Freeman Hospital, Newcastle

QFG testing kit - contact laboratory for supply

Rabies Antibodies / Titres

Animal and Plant Health Agency, New Haw, Addlestone, Weybridge, Surrey, KT15 3NB

 

 

 

Serum / SST (ochre top)

West Nile Virus IgM

Rare and Imported Pathogens Laboratory, PHE Porton

Serum / SST (ochre top)

Tick Borne encephalitis Virus IgG (IF)

Japanese encephalitis virus IgG (IF)

Yellow Fever virus IgG (IF)

Chikungunya Virus IgG (EIA)

Chikungunya Virus IgM (EIA)

Chikungunya Virus RNA

V. equine encephalo. Virus IgG (IF)

Sandfly fever Sicilian virus IgG (IF)

Sandfly fever Naples virus IgG (IF)

Sandfly Toscana virus IgG (IF)

Sandfly Cyprus virus IgG (IF)

Spotted Fever Group IgM (IFA)

Spotted Fever Group IgG (IFA)

Epidemic Typhus Group IgM (IFA)

Epidemic Typhus Group IgG (IFA)

O. tsutsugamushi IgG (EIA)

O. tsutsugamushi IgM (EIA)

Rash (maculopapular) in pregnancy

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Respiratory CFTs

Infection Sciences, Bristol

Serum / SST (ochre top)

Rickettsia

RIPL, PHE Porton

Serum / SST (ochre top)

Schistosoma (Bilharzia)

University College London (School of Tropical Medicine)

Serum / SST (ochre top)

Syphilis Confirmation

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Syphilis screen (referred)

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Syphilis PCR inc. HSV & H. ducreyi

 

STBRU, PHE Colindale

Swab of lesion / viral swab (green top) or dry swab (purple top)

Syphilis PCR on CSF (often organised through GUM)

PCR Laboratory, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Swine Flu (as part of the respiratory viruses panel / flu screen)

PCR Laboratory, Freeman Hospital, Newcastle

 

Serum / SST (ochre top)

TATT screen

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

TB / AFB / Mycobacteria

TB Laboratory, Freeman Hospital, Newcastle

Sputum, BAL, tissues, fluids, CSF

Teicoplanin Levels

Bristol Antimicrobial Reference Laboratory

Serum / SST (ochre top)

Tetanus Antibodies

Immunology, Carlisle

Serum / SST (ochre top)

Thermoactinomyces PPT

Immunology, Carlisle

Serum / SST (ochre top)

Tobramycin Random Levels

Freeman Hospital, Newcastle

Serum / SST (ochre top)

Tobramycin Pre Dose Levels

Freeman Hospital, Newcastle

Serum / SST (ochre top)

Tobramycin Post Dose Levels

Freeman Hospital, Newcastle

Serum / SST (ochre top)

TORCH (mother)

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

TORCH (baby)

Serology / PCR Laboratory, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Toxocara antibodies

University College London (School of Tropical Medicine)

Serum / SST (ochre top)

Toxoplasma IgM & IgG

Serology, Freeman Hospital, Newcastle

Serum / SST (ochre top)

Toxoplasma Dye Test

Toxoplasma Reference Laboratory, Swansea

Serum / SST (ochre top)

Varicella (Viral Swab)

PCR Laboratory, Freeman Hospital, Newcastle

Viral swab (green top)

Voriconazole level

Mycology Reference Centre, Manchester, Wythenshawe

Serum / SST (ochre top)

Weils Disease (Leptospirosis)

Must be >7days since onset of symptoms

RIPL, PHE Porton

Serum / SST (ochre top)

West Nile Virus

RIPL, PHE Porton

Serum / SST (ochre top)

Zika Virus IgG (EIA) serum/ EDTA

RIPL, PHE Porton

Serum / SST (ochre top)

Zika Virus IgM (EIA) serum/EDTA

RIPL, PHE Porton

Serum / SST (ochre top)

Zika Virus PCR  EDTA / urine

RIPL, PHE Porton

Serum / SST (ochre top)

What are turnaround times?

The local microbiology turnaround time (TAT) for each test is defined as the time of the receipt of the specimen into the pathology laboratories (UHND, BAGH or DMH) to the time when the report is available to the requester (electronically in most cases). TATs are specific to individual tests or specimen types.

How are average turnaround times measured in microbiology?

The average TAT for a test is determined using information from all of the tests performed in the previous year i.e. how long 'on average' they took from receipt to report. This data takes into account all tests, taken at all times, with all combinations of negative and positive results and follow-up work.

TATs can vary greatly depending on a number of factors including the time of receipt, culture or test result and priority of testing so the individual test results within this measured average TAT are usually spread over a wide timeframe.

Defined turnaround times in microbiology

Some microbiology tests have nationally agreed TATs, or are agreed with service users, for example antenatal screening tests and sexual health molecular tests. In these cases our local TAT are measured against these targets.

Why are microbiology turnaround times much longer than for other pathology services?

The majority of microbiology tests are still based on the culture of bacteria which require incubation for days rather than hours. Further confirmatory testing, e.g. antimicrobial sensitivity testing, also relies on the growth of the bacteria for a further period of time.

What about urgent results?

The TAT listed below are from the time of receipt to the finished report being available to the user. Interim reports may also be issued for urgent or partial results e.g. a microscopy result will be available within the same day but the culture result may take a further few days to complete the report.

The consultant microbiologists are informed of results that require notification prior to the completed report and contact the requesting clinician to advise as appropriate.

All urgent requests should be communicated to the laboratory e.g. CSFs, urgent gram stains, etc. See individual handbook pages for further details.

Turnaround Times in Microbiology

 

Test

(C&S = culture and sensitivity)

Average Measured TAT to completed report

(based on previous year)

Defined TAT to completed report

(agreed or nationally defined target)

Bacteriology & Mycology

Blood culture C&S

<6 days

-

CSF C&S*

< 4 days

-

Ear swab C&S

< 5 days

-

Eye swab C&S

< 5 days

-

Faeces C&S, virology and parasitology

< 5 days

-

Sterile fluid C&S*

< 11 days

-

Genital swab C&S

< 5 days

-

N.gonorrhoeae (GC) C&S

< 5 days

-

MRSA screen

< 2 days

-

Nasal swab C&S

< 5 days

-

Mouth swab C&S

< 4 days

-

Mycology microscopy & culture

< 20 days

-

Pleural fluid C&S*

< 6 days

-

Pre-operative screening swab (S.aureus)

< 3 days

-

Sputum C&S

< 7 days

-

Tissue & biopsy C&S

< 13 days

-

Throat swab C&S

< 5 days

-

Urine microscopy, C&S

< 4 days

-

Wound swab

< 5 days

-

Molecular

Chlamydia trachomatis

<7 days

7 days

N.gonorrhoeae (GC)

< 7 days

7 days

Herpes Simplex Virus (HSV)

< 8 days

-

Serology

 

 

Antenatal screening

<7 days

8 days

Anti-Streptolysin O

<12 days

-

Hepatitis A Total Ab

<12 days

-

Hepatitis B Core Ab

<9 Days

 

Hepatitis B Surface Ab

<9 days

-

Hepatitis C Screen

<9 days

-

HIV Screen (non-neonatal)

<7 days

-

Syphilis Screen

<7 days

-

NB urgent gram stain / microscopy <2 hours available on request - see rel

Point of Care Testing

Point-of-care testing (POCT) is a form of testing in which the analysis is carried out at the point where healthcare is provided, close or near to the patient, in various clinical departments. The key objective of POCT is to provide diagnostic results more quickly, facilitating faster clinical decision-making and improved patient outcomes. The Point of Care Testing Department is based within Pathology department DMH and operates across all CDDFT sites. The POCT team supports all departments that use POCT equipment across the trusts and beyond, including GP surgeries and Community Hospitals

Speed of diagnosis and treatment: POCT testing is very efficient, as the test is performed at the bedside or in close proximity to where the patient is being treated. This means that the treating clinician is able to see the results quickly and make rapid decisions about patient care.

The process is also more efficient for clinicians as, due to the speed of testing, they do not need to re-familiarise themselves with each case when test results come back.

Expanded testing capabilities: POCT means that laboratory testing can be provided in a wide variety of settings in both primary and secondary care.

Specimen stability and ease of handling: POCT reduces the risk of sample deterioration, as the tests are performed rapidly once the sample has been taken.

  • Reduced potential for sample deterioration, since most POCT is initiated and performed rapidly once the sample is obtained.
  • As POCT sample volumes are 1ml or less, there is less blood loss and potential anaemia for patients requiring frequent testing, as well as being beneficial for neonatal and paediatric samples.

Portable devices: The portable size of POCT devices means that less space is needed for operation and storage. It also means that testing can be carried out in a wide variety of locations that would previously have not been possible. POCT can be flexible to meet the diversity of medical needs.

  • Diminished space requirements for operation and storage.
  • Flexibility to meet the diversity of medical needs.

Improved patient outcomes and satisfaction: The immediate availability of test results means that patients can be diagnosed more effectively and can be moved through the system faster. This allows more patients to be treated in a shorter timeframe.

Economic and operational outcomes: The use of POCT can result in:

  • shorter lengths of stay in emergency departments
  • shorter lengths of admission
  • efficiency in the use of hospital capacity
  • the avoidance of unnecessary admissions
  • More effective use of outpatient and rapid access clinics.

What POCT can offer

  • Bespoke quality-assured POCT solutions tailored to the specific clinical requirement of your department within the trust and GP practices
  • Comprehensive implementation plan including validation and verification, documentation, internal quality control, external quality assurance, reagent management, training and audit.
  • On-going training and competency assessment of the operators in conjunction with allocated Link Nurses.
  • Technical support and maintenance and servicing of all POCT devices and analysers.
  • Contingency and business continuity plans.

Contact us

If you want to find out more about the POCT solutions that our team can offer you, or any queries regarding training, password updates or POCT analysers you can contact:

  • Andy Craggs POCT Co-ordinator
  • Deborah Grey POCT Associate Practitioner
  • Dominic Ramsey POCT Associate Practitioner

Email: cddft.poct@nhs.net or telephone: 01325 380100 or ext: 44172

Ordering POCT Consumables

POCT consumables can be obtained from pathology reception at UHND, DMH and BAH. Order forms must be fully completed, including ward name and cost centre number (not branch number which starts with CD) request for orders should be within the hours of 9am - 4pm, Monday to Friday. 

POCT Competency Documents

Point of Care competency documents are listed below, please contact the team once completed.

Clinical Trials

The pathology department is involved in an ever increasing portfolio of studies over a wide range of speciality groups across the whole of the Trust. These trials range from small scale in house studies to large scale multinational clinical trials. All of this work is helping shape the future of medicine not only allowing trust patients access to some of the most cutting edge treatments in the world, but helping improve treatment and care for patients throughout the world.

For Pathology Research information, please contact John Fletcher, Blood Sciences Service Manager: john.fletcher7@nhs.net